Several L-arginine analogs are known as potent inhibitors of nitric oxide s
ynthase (NOS). We recently synthesized dipeptides containing such amino aci
ds, and found that they are potent and isozyme-selective NOS inhibitors. Fo
r example, S-methyl-L-isothiocitrullinyl-L-phenylalanine showed 66-fold sel
ectivity for iNOS over nNOS, while S-methyl-L-isothiocitrullinyl-L-leucine
and N-G-nitro-L-argininyl-L-phenylalanine showed 20- and 14-fold selectivit
y, respectively, Interestingly, S-methyl-L-isothiocitrullinyl-L-phenylalani
ne showed no selectivity add S-methyl-L-isothiocitrullinyl-L-phenylalanine
showed competitive inhibition. These results suggest that each NOS isozyme
has a cavity of different size near the C-terminal of the L-arginine bindin
g site, and that the selectivity of inhibitors is due to the differences in
the size of the cavity.