Meiotic chromosomes are organized about a proteinaceous core that forms bet
ween replicated sister chromatids. We have isolated a Caenorhabditis elegan
s gene, him-3, which encodes a meiosis-specific component of chromosome cor
es with some similarity to the yeast lateral element protein Hop1p. Antibod
ies raised against HIM-3 localize the protein to condensing chromosomes in
early prophase I and to the cores of both synapsed and desynapsed chromosom
es. In RNA interference experiments, chromosomes appear to condense normall
y in the absence of detectable protein but fail to synapse and form chiasma
ta, indicating that HIM-3 is essential for these processes. Hypomorphs of h
im-3, although being synapsis proficient, show severe reductions in the fre
quency of crossing-over, demonstrating that HIM-3 has a role in establishin
g normal levels of interhomolog exchange. Him-3 mutants also show defects i
n meiotic chromosome segregation and the persistence of the protein at the
chromosome core until the metaphase I-anaphase I transition suggests that H
IM-3 may play a role in sister chromatid cohesion. The analysis of him-3 pr
ovides the first functional description of a chromosome core component in a
multicellular organism and suggests that a mechanistic link exists between
the early meiotic events of synapsis and recombination, and later events s
uch as segregation.