SOLUTION CONFORMATION OF ALPHA-METHYLGLUTAMYL-CONTAINING, BETA-METHYLGLUTAMYL-CONTAINING OR GAMMA-METHYLGLUTAMYL-CONTAINING DERIVATIVES AS PROBES OF VITAMIN-K-DEPENDENT CARBOXYLASE USING MOLECULAR MODELING ANDNUCLEAR-MAGNETIC-RESONANCE
V. Larue et al., SOLUTION CONFORMATION OF ALPHA-METHYLGLUTAMYL-CONTAINING, BETA-METHYLGLUTAMYL-CONTAINING OR GAMMA-METHYLGLUTAMYL-CONTAINING DERIVATIVES AS PROBES OF VITAMIN-K-DEPENDENT CARBOXYLASE USING MOLECULAR MODELING ANDNUCLEAR-MAGNETIC-RESONANCE, International journal of biological macromolecules, 20(2), 1997, pp. 131-159
in the present study, the conformational behaviour of methyl substitut
ed N-BOC glutamic acid methyl esters (2M, 3T, 3E, 4T, 4E) has been com
pletely characterized through combined NMR and molecular modeling stud
ies. Hetero- and homonuclear coupling constants were measured in order
to assign the remaining diastereotopic methylene protons at C(3) and/
or C(4), and used for comparison with theoretical data. In parallel, t
he complete conformational analysis of these analogues has been achiev
ed using molecular mechanics and molecular dynamics (MD)methods. The c
onformation of the glutamyl residue is established by the excellent ag
reement between the experimental and calculated side chain scalar coup
ling constants. The theoretical NMR data were calculated taking into a
ccount all the accessible conformations and using the averaging method
s appropriate for internal motions. There is a significant influence o
f the methyl group on the conformational behaviour and on the biologic
al relevance of these structures. Steric effect or electrostatic inter
action may also have a considerable influence in stabilizing a conform
ational population in D2O solution. The conformational preferences of
those different analogues in aqueous and methanol solution are discuss
ed in the light of biological results obtained on the vitamin K-depend
ent carboxylase system. (C) 1997 Elsevier Science B.V.