Identification of Cecidophyopsis mites (Acari : Eriophyidae) based on variable simple sequence repeats of ribosomal DNA internal transcribed spacer-1sequences via multiplex PCR
Pl. Kumar et al., Identification of Cecidophyopsis mites (Acari : Eriophyidae) based on variable simple sequence repeats of ribosomal DNA internal transcribed spacer-1sequences via multiplex PCR, INSEC MOL B, 8(3), 1999, pp. 347-357
A PCR multiplex technique was developed for identifying Cecidophyopsis mite
s using species-specific differences in rDNA ITS-I sequences. Four PCR prim
ers derived from ITS-1 were used for the simultaneous amplification (multip
lex PCR) of interspecifically variable simple sequence repeats (vSSRs). Mit
es were identified by electrophoresing PCR products alongside those obtaine
d from plasmids containing ITS copies of known mite species. The multiplex
PCR assay was rapid, reproducible and had a sensitivity comparable to seque
ncing. It was used to identity mite specimens on Ribes from around the worl
d. It also identified a profile from mites on R. rubrum that had no equival
ent amongst the known Cecidophyopsis species. Sequence and ecological analy
sis of this mite suggest that it is a new species of nongall-forming Cecido
phyopsis mite.