Energy landscapes, supergraphs, and "folding funnels" in spin systems

Citation
P. Garstecki et al., Energy landscapes, supergraphs, and "folding funnels" in spin systems, PHYS REV E, 60(3), 1999, pp. 3219-3226
Citations number
25
Categorie Soggetti
Physics
Journal title
PHYSICAL REVIEW E
ISSN journal
1063651X → ACNP
Volume
60
Issue
3
Year of publication
1999
Pages
3219 - 3226
Database
ISI
SICI code
1063-651X(199909)60:3<3219:ELSA"F>2.0.ZU;2-D
Abstract
Dynamical connectivity graphs, which describe dynamical transition rates be tween local energy minima of a system, can be displayed against the backgro und of a disconnectivity graph which represents the energy landscape of the system. The resulting supergraph describes both dynamics and statics of th e system in a unified coarse-grained sense. We give examples of the supergr aphs, for several two-dimensional spin and protein-related systems. We demo nstrate that disordered ferromagnets have, supergraphs akin to those of mod el proteins whereas spin glasses behave like random sequences of amino acid s that fold badly. [S1063-651X(99)14808-6].