Backbone dynamics of azurin in solution: Slow conformational change associated with deprotonation of histidine 35

Citation
Ap. Kalverda et al., Backbone dynamics of azurin in solution: Slow conformational change associated with deprotonation of histidine 35, BIOCHEM, 38(39), 1999, pp. 12690-12697
Citations number
56
Categorie Soggetti
Biochemistry & Biophysics
Journal title
BIOCHEMISTRY
ISSN journal
00062960 → ACNP
Volume
38
Issue
39
Year of publication
1999
Pages
12690 - 12697
Database
ISI
SICI code
0006-2960(19990928)38:39<12690:BDOAIS>2.0.ZU;2-W
Abstract
N-15 relaxation measurements have been performed on the type I blue copper protein azurin from Pseudomonas aeruginosa. The relaxation times show that one loop (residues 103-108) and one turn (residues 74-77) display fast inte rnal motions, The rest of the protein is rigid with an average order parame ter S-2 of 0.85 +/- 0.05. The copper binding site shows the same degree of rigidity even though is it composed of several loops and lies outside the b eta-sheet sandwich. Substantial exchange broadening was found for a number of residues surrounding the side chain of His-35. The average exchange rate has been determined from NMR exchange spectroscopy experiments and is 45 /- 6 s(-1) at 41 degrees C. The exchange broadening is caused by the proton ation/deprotonation equilibrium of His-35, The NMR results indicate that th e two structures of azurin observed by X-ray diffraction of crystals at pH 5.5 and 9.0 [Nar, H., Messerschmidt, A., Huber, R., Van de Kamp, M., Canter s, G. W. (1991) J. Mol. Biol, 221, 765-772] are present in solution and tha t they interconvert slowly.