The fusion of transport vesicles with their cognate target membranes, an es
sential event in intracellular membrane trafficking, is regulated by SNARE
proteins and Rab GTPases. Rab GTPases are thought to act prior to SNAREs in
vesicle docking, but the exact biochemical relationship between the two cl
asses of molecules is not known. We recently identified the early endosomal
autoantigen EEA1 as an effector of Rab5 in endocytic membrane fusion. Here
we demonstrate that EEA1 interacts directly and specifically with syntaxin
-6, a SNARE implicated in trans-Golgi network to early endosome trafficking
. The binding site for syntaxin-6 overlaps with that of Rab5-GTP at the C t
erminus of EEA1. Syntaxin-6 and EEA1 were found to colocalize extensively o
n early endosomes, although syntaxin-6 is present in the trans-Golgi networ
k as well. Our results indicate that SNAREs can interact directly with Rab
effecters, and suggest that EEA1 may participate in trans-Golgi network to
endosome as well as in endocytic membrane traffic.