To date, despite the increasing number of genomic tools, there is no reposi
tory of ordered human BAC clones that covers entire chromosomes. This proje
ct presents a resource of mapped large DNA fragments that span eight human
chromosomes at similar to 1-Mb resolution. These DNA fragments are bacteria
l artificial chromosome (BAC) clones anchored to sequence tagged site (STS)
markers. This clone collection, which currently contains 759 mapped clones
, is useful in a wide range of applications from microarray-based gene mapp
ing to identification of chromosomal mutations. In addition to the clones t
hemselves, we describe a database, GenMapDB (http://genomics.med.upenn.edu/
genmapdb), that contains information about each clone in our collection.