In order to illustrate the relevance of the concepts and methods of evoluti
onary genetics in the understanding of the epidemiology of pathogenic agent
s, we develop in this paper the case of the Leishmania, a genus of parasiti
c protozoa. An extensive study of various natural populations of Leishmania
in different countries (Old and New World) was carried out by using Multil
ocus Enzyme Electrophoresis (MLEE) and Random Amplified Polymorphic DNA fin
gerprinting (RAPD) as genetic markers. The data have been interpreted in ev
olutionary genetic terms. The main benefit of this approach has been to bet
ter define the concept of species in the genus Leishmania, on rigorous phyl
ogenetic bases. As a matter of fact, a sound taxonomical background is a pr
erequisite for any epidemiological approach. Since the biological concept o
f species is difficult or impossible to apply for most pathogenic microorga
nisms, we recommend relying on criteria of both phylognetic discreteness an
d of epidemiological/medical relevance to describe new species of Leishmani
a. Through this approach, fbr example, we have shown that the species statu
s of L. (V.) peruviana can be supported. On the contrary; we have been unab
le to clearly distinguish L. (V.) panamensis from L. (V.) guyanensis with g
enetic tools. Additionally, we have shown that the epidemiological inferenc
es based on a limited set of genetic markers can be misleading. As a matter
of fact, we have demonstrated that a collection of L. (L.) infantum stocks
identified, as zymodeme 'MON 1' by other authors present additional geneti
c heterogeneity and do not correspond to a. distinct 'Discrete Typing Unit'
DTU, and are actually polyphyletic. Lastly, in the samples that were conve
niently designed, we have confirmed that Leishmania parasites have a basica
lly clonal population structure. As the clonal model specifies it, occasion
al bouts of genetic exchange remain nevertheless possible. Telling comparis
ons are drawn with the evolutionary genetics of other pathogens Typanosoma
cruzi and Trypanosoma congolense. (C) 1999 Australian Society for Parasitol
ogy Inc. Published by Elsevier Science Ltd. All rights reserved.