Objectives/Hypothesis: Clinical and molecular patterns of head and neck squ
amous cell carcinoma (HNSCC) in nonsmokers and smokers may be differ ent, A
nalysis of these patterns may improve understanding and management of this
disease. Study Design: three hundred five subjects were included (46 nonsmo
kers, 29 former smokers, and 230 smokers). Subsets were analyzed for p53 mu
tation, human papillomavirus (HPV), and loss of heterozygosity (LOH) at 10
chromosomal loci. Methods: Clinical information was analyzed for common pat
terns of disease among the groups. The p53 gene was sequenced, and polymera
se chain reaction was used to detect HPV DNA and LOH at two microsatellite
markers for each loci. The chi(2) test was used to assess differences in ge
netic alterations between groups, logistic regression to examine the indepe
ndence of association of tobacco exposure with each alteration, and Kaplan
Meier estimates and the log-rank statistic to assess differences in surviva
l. Results: Nonsmokers included a disproportionate number of women, oral ca
vity (especially tongue) tumors, and very young or old individuals. Smokers
had more tumors of the larynx, hypopharynx, and floor of mouth. The rate o
f p53 mutation was much greater in smokers; the percentage with HPV was mar
ginally lower. The percentage of LOH at 3p, 4q, and 11q13, and the overall
average number of chromosomal losses, was significantly lower in nonsmokers
' tumors. Survival did not vary with smoking or age. Conclusions: The clini
cal and genetic features of HNSCC are distinct between groups defined by to
bacco use, Tumors of nonsmokers contain a lower frequency of common genetic
alterations, suggesting that the underlying changes in these tumors may re
main undiscovered.