Crystal structure of the EF-hand parvalbumin at atomic resolution (0.91 angstrom) and at low temperature (100 K). Evidence for conformational multistates within the hydrophobic core
Jp. Declercq et al., Crystal structure of the EF-hand parvalbumin at atomic resolution (0.91 angstrom) and at low temperature (100 K). Evidence for conformational multistates within the hydrophobic core, PROTEIN SCI, 8(10), 1999, pp. 2194-2204
Several crystal structures of parvalbumin (Parv), a typical EF-hand protein
, have been reported so far for different species with the best resolution
achieving 1.5 Angstrom. Using a crystal grown under microgravity conditions
, cryotechniques (100 K), and synchrotron radiation, it has now been possib
le to determine the crystal structure of the fully Ca2+-loaded form of pike
(component pI 4.10) Parv.Ca-2 at atomic resolution (0.91 Angstrom). The av
ailability of such a high quality structure offers the opportunity to contr
ibute to the definition of the validation tools useful for the refinement o
f protein crystal structures determined to lower resolution. Besides a bett
er definition of most of the elements in the protein three-dimensional stru
cture than in previous studies, the high accuracy thus achieved allows the
detection of well-defined alternate conformations, which are observed for 1
6 residues out of 107 in total. Among them, six occupy an internal position
within the hydrophobic core and converge toward two small buried cavities
with a total volume of about 60 Angstrom(3). There is no indication of any
water molecule present in these cavities. It is probable that at temperatur
es of physiological conditions there is a dynamic interconversion between t
hese alternate conformations in an energy-barrier dependent manner. Such mo
tions for which the amplitudes are provided by the present study will be as
sociated with a time-dependent remodeling of the void internal space as par
t of a slow dynamics regime (millisecond timescales) of the parvalbumin mol
ecule. The relevance of such internal dynamics to function is discussed.