We extend our basic discrete-event model of Plasmodium falciparum malaria t
o encompass circumstances in which multiple phenotypic variants of the para
site circulate within interacting human and mosquito populations, and we co
mpare a version in which variants behave independently to one in which they
interact through shared host immune responses. Relative to the standard hy
pothesis of statistical independence, frequencies of mixed-phenotype infect
ion in humans were as expected in the independent-immunity version anf much
less than expected in the cross-immunity version; in both versions, howeve
r, such frequencies in mosquitoes were much greater than expected.