The Australian ghost bat is a large, opportunistic carnivorous species that
has undergone a marked range contraction toward more mesic, tropical sites
over the past century. Comparison of mitochondrial DNA (mtDNA) control reg
ion sequences and six nuclear microsatellite loci in 217 ghost bats from ni
ne populations across subtropical and tropical Australia revealed strong po
pulation subdivision (mtDNA phi(ST) = 0.80; microsatellites URST = 0.337).
Low-latitude (tropical) populations had higher heterozygosity and less mark
ed phylogeographic structure and lower subdivision among sites within regio
ns (within Northern Territory [NT] and within North Queensland [NQ]) than d
id populations at higher latitudes (subtropical sites; central Queensland [
CQ]), although sampling of geographically proximal breeding sites is unavoi
dably restricted for the latter. Gene flow among populations within each of
the northern regions appears to be male biased in that the difference in p
opulation subdivision for mtDNA and microsatellites (NT phi(ST) = 0.39, URS
T = 0.02; NQ phi(ST) = 0.60, URST = -0.03) is greater than expected from di
fferences in the effective population size of haploid versus diploid loci.
The high level of population subdivision across the range of the ghost bat
contrasts with evidence for high gene flow in other chiropteran species and
may be due to narrow physiological tolerances and consequent limited avail
ability of roosts for ghost bats, particularly across the subtropical and r
elatively arid regions. This observation is consistent with the hypothesis
that the contraction of the species' range is associated with late Holocene
climate change. The extreme isolation among higher-latitude populations ma
y predispose them to additional local extinctions if the processes responsi
ble for the range contraction continue to operate.