T. Aoki et al., Sequences of 596 cDNA clones (565,977 bp) of Japanese flounder (Paralichthys olivaceus) leukocytes infected with hirame rhabdovirus, MAR BIOTEC, 1(5), 1999, pp. 477-488
We have partially sequenced 785 sequences of 596 independent complementary
DNA clones isolated from a cDNA library of Japanese flounder leukocytes inf
ected with hirame rhabdovirus. These sequences consist of a total of 565,97
7 base pairs. The average size of the sequenced lengths was 721 bp. Of 596
clones, 386 (64.8%) were identified as previously reported genes by the BLA
STN and BLASTX programs. About 30% of the identified clones could be recogn
ized by only the BLASTX program. A total of 251 distinct genes were identif
ied, and 181 of these genes are the first such genes reported from the tele
ostei. Approximately 27% of the identified Japanese flounder genes appear t
o be associated with cell division, cell structure or motility, and basic e
nergy metabolism, 29% with gene or protein expression, and 17% with cell si
gnaling, cell communication, and cell or organism defense. The most frequen
tly identified expressed sequence tags of leukocytes of Japanese flounder w
ere gelatinase b and ribosomal protein L23, which both had 1.34% prevalence
.