Full-length cDNAs coding for two distinct acyl-CoA oxidases were isolated b
y screening an Arabidopsis cDNA library. The genes for the two acyl-CoA oxi
dases have been termed AtACX1 and AtACX2. AtACX1 encodes a peptide of 664 a
mino acids possessing a molecular mass of 74.3 kDa. AtACX2 encodes a peptid
e of 691 amino acids in length with a molecular mass of 77.5 kDa. Peroxisom
al targeting signals were identified in the primary sequences. AtACX1 has a
putative PTS1, whereas AtACX2 has a characteristic PTS2. Expression of AtA
CX1 and AtACX2 in Escherichia coli gave active enzymes for enzymatic and bi
ochemical analysis. AtACX1 was active with both medium-and long-chain satur
ated fatty acyl-CoAs and showed maximal activity with C14-CoA. Activity wit
h mono-unsaturated acyl-CoAs was slightly higher than with the correspondin
g saturated acyl-CoA. AtACX2 was active with long-chain acyl-CoAs and showe
d maximal activity with C18-CoA. AtACX2 activity with mono-unsaturated acyl
-CoAs was approximately twice as high as with the corresponding saturated a
cyl-CoA, Both enzymes have an apparent K-m of approximately 5 mu M with the
preferred substrate. Northern analysis was conducted to determine the expr
ession patterns of AtACX1 and AtACX2 during germination and in various tiss
ues of a mature plant. The two genes showed generally similar expression pr
ofiles and steady-state mRNA levels in seedlings and mature tissues, but su
btle differences were observed. Enzymatic analyses of plant extracts reveal
ed that AtACX1 and AtACX2 are members of a family that includes acyl-CoA ox
idases specific for shorter-chain acyl-CoAs. Through expression of antisens
e constructs of the individual genes, we were able to decrease long-chain o
xidase activity only in antisense AtACX1 plants. Seedlings with long-chain
oxidase activity reduced down to 30% of wild-type levels germinated and est
ablished normally; however, reduced root growth appeared to be a general fe
ature of antisense AtACX1 plants.