Jb. Koerner et T. Ichiye, CONFORMATIONAL DEPENDENCE OF THE ELECTRONIC-PROPERTIES OF [FE(SCH3)(4)](-,2-), JOURNAL OF PHYSICAL CHEMISTRY B, 101(18), 1997, pp. 3633-3643
The electronic properties of [Fe(SCH3)(4)](-2-), a model for the iron-
sulfur site in rubredoxin, and the conformational dependence of these
properties were investigated with ab initio calculations. The calculat
ions were done at the unrestricted Hartree-Fock level with various bas
is sets, and the effects of electron correlation were tested in some c
alculations using second-order perturbation theory. The conformational
dependence was studied using five conformations of the model complex
that differed by rotations about the Fe-S and C-S bonds. Geometry opti
mizations showed that these bond lengths changed little among the conf
ormations examined, except where steric crowding existed. The atomic s
pin populations and spin contamination values (S-2) were also homogene
ous among the conformations. The relative energies of all but one of t
he conformations were very small in both the oxidized and reduced stat
es; thus, the total energy changes upon reduction, Delta E-redox, of a
ll but one of the conformations were within 30 mV of each other. The e
xception was about 100 mV less negative than the other four structures
and represents a less likely dihedral rotation transition state. More
important, the difference of only 30 mV between conformations similar
to that of the iron-sulfur site in rubredoxin and in the Holm-Ibers a
nalogue indicates that very little of the 800 mV difference in redox p
otential between rubredoxin and in the Holm-Ibers analogue can be attr
ibuted strictly to conformationally dependent differences in electroni
c structure. In addition, atom-centered partial charges were determine
d by Mulliken's method and two different electrostatic potential (ESP)
fitting methods: the surface-based geodesic tessellation method and t
he grid-based CHELPG method. For all three methods, the partial charge
distributions showed little conformational dependence. Moreover, the
Mulliken charges, which are not subject to the problems of buried atom
s associated with ESP methods, indicate very little conformational dep
endence. The CHELPG partial charges were selected as being the most re
asonable for ESP calculations; thus, a geometry independent set of CHE
LPG partial charges is proposed.