Exact digital simulation of time-invariant linear systems with applications to neuronal modeling

Citation
S. Rotter et M. Diesmann, Exact digital simulation of time-invariant linear systems with applications to neuronal modeling, BIOL CYBERN, 81(5-6), 1999, pp. 381-402
Citations number
37
Categorie Soggetti
Neurosciences & Behavoir
Journal title
BIOLOGICAL CYBERNETICS
ISSN journal
03401200 → ACNP
Volume
81
Issue
5-6
Year of publication
1999
Pages
381 - 402
Database
ISI
SICI code
0340-1200(199911)81:5-6<381:EDSOTL>2.0.ZU;2-6
Abstract
An efficient new method for the exact digital simulation of time-invariant linear systems is presented. Such systems are frequently encountered as mod els for neuronal systems, or as submodules of such systems. The matrix expo nential is used to construct a matrix iteration, which propagates the dynam ic state of the system step by step on a regular time grid. A large and gen eral class of dynamic inputs to the system, including trains of delta-pulse s, can be incorporated into the exact simulation scheme. An extension of th e proposed scheme presents an attractive alternative for the approximate si mulation of networks of integrate-and-fire neurons with linear sub-threshol d integration and non-linear spike generation. The performance of the propo sed method is analyzed in comparison with a number of multi-purpose solvers . In simulations of integrate-and-fire neurons, Exact Integration systemati cally generates the smallest error with respect to both sub-threshold dynam ics and spike timing. For the simulation of systems where precise spike tim ing is important, this results in a practical advantage in particular at mo derate integration step sizes.