Antiestrogens such as tamoxifen are one of the most effective methods of tr
eating estrogen receptor (ER alpha) positive breast cancers; however, the e
ffectiveness of this therapy is limited by the almost universal development
of resistance to the drug. If antiestrogens are recognized differently by
the cell as it has been suggested, then in disease conditions where tamoxif
en fails to function effectively, a mechanistically different antiestrogen
might yield successful results. Although many antiestrogens have been devel
oped, a direct comparison of their mechanisms of action is lacking, thus li
miting their utility. Therefore, to determine if there are mechanistic diff
erences among available antiestrogens, we have carried out a comprehensive
analysis of the molecular mechanisms of action of 4-hydroxy-tamoxifen (4OHT
), idoxifene, raloxifene, GW7604, and ICI 182,780. Using a novel set of pep
tides that recognize different surfaces on ER alpha, we have found that fol
lowing binding to ER alpha, each ligand induces a distinct ER alpha-ligand
conformation. Furthermore, transcriptional assays indicate that each ER alp
ha-ligand complex is recognized distinctly by the transcription machinery,
and consequently, antiestrogens vary in their ability to inhibit estradiol-
and 4OHT-mediated activities. Relative binding assays have shown that the
affinity of these ligands for ER alpha is not always representative of thei
r inhibitory activity. Using this assay, we have also shown that the pharma
cology of each antiestrogen is influenced differently by hormone binding pr
oteins. Furthermore, GW7604, like ICI 182, 780, but unlike the other anties
trogens evaluated, decreases the stability of the receptor. Overall, our re
sults indicate that there are clear mechanistic distinctions among each of
the antiestrogens studied. However, GW7604 and ICI 182,780 differ more sign
ificantly from tamoxifen than idoxifene and raloxifene. These data, which r
eveal differences among antiestrogens, should assist in the selection of co
mpounds for the clinical regulation of ER alpha function.