We describe an extension of the variance component linkage method that augm
ents identity-by-descent information from relatives with identity-by-state
information from unrelated individuals, exploiting disequilibrium to facili
tate fine mapping of quantitative trait loci. An advantage of the combined
linkage/disequilibrium test is that it detects association only in the pres
ence of linkage and is not biased by population stratification. (C) 1999 Wi
ley-Liss, Inc.