Rank deficient least squares problems appear in obtaining numerical solutio
n of differential equations, computational genetics and other applications.
The usual methods to solve the problem are QR decomposition. It is well-kn
own that for large sparse problems, iterative methods are preferable. Mille
r and Neumann (1987) proposed the 4-block SOR method, and Santos, Silva and
Yuan (1997) proposed the 2-block SOR method and the 3-block SOR method for
solving the problem. Here some preconditioned conjugate gradient methods a
re proposed for solving the problem. The error bound and comparison with bl
ock SOR methods are studied. We show the best iterative method is the preco
nditioned conjugate gradient method for solving rank deficient least square
s problems.