Self-association and domains of interactions of an amphipathic helix peptide inhibitor of HIV-1 integrase assessed by analytical ultracentrifugation and NMR experiments in trifluoroethanol/H2O mixtures
Rg. Maroun et al., Self-association and domains of interactions of an amphipathic helix peptide inhibitor of HIV-1 integrase assessed by analytical ultracentrifugation and NMR experiments in trifluoroethanol/H2O mixtures, J BIOL CHEM, 274(48), 1999, pp. 34174-34185
EAA26 (VESMNEELKKIIAQVRAQAEHLKTAY) is a better inhibitor of human immunodef
iciency virus, type 1, integrase than its parent Lys-159, reproducing the e
nzyme segment 147-175 with a nonpolar-polar/charged residue periodicity def
ined by four helical heptads (abcdefg) prone to collapse into a coiled-coil
. Circular dichroism, nuclear magnetic resonance, sedimentation equilibrium
, and chemical cross-linking were used to analyze EAA26 in various trifluor
oethanol/H2O mixtures. In pure water the helix content is weak but increase
s regularly up to 50-60% trifluoroethanol. In contrast the multimerization
follows a bell-shaped curve with monomers in pure water, tetramers at 10% t
rifluoroethanol, and dimers at 40% trifluoroethanol, All suggest that inter
helical interactions between apolar side chains are required for the coiled
-coil formation of EAA26 and subsist at medium trifluoroethanol concentrati
on. The N-H temperature coefficients measured by nuclear magnetic resonance
show that at low trifluoroethanol concentration the amide groups buried in
the hydrophobic interior of four alpha-helix bundles are weakly accessible
to trifluoroethanol and are only weakly subject to its hydrogen bond stren
gthening effect. The increased accessibility of trifluoroethanol to buried
amide groups at higher trifluoroethanol concentration entails the reduction
of the hydrophobic interactions and the conversion of helix tetramers into
helix dimers, the latter displaying a smaller hydrophobic interface. The b
etter inhibitory activity of EAA26 compared with Lys-159 could arise from i
ts better propensity to form a helix bundle structure with the biologically
important helical part of the 147-175 segment in integrase.