In Papua New Guinea (PNG), numerous blood group polymorphisms and hemoglobi
nopathies characterize the human population. Human genetic polymorphisms of
this nature are common in malarious regions, and all four human malaria pa
rasites are holoendemic below 1500 meters in PNG. At this elevation, a prom
inent condition characterizing Melanesians is alpha(+)-thalassemia. Interes
tingly. recent epidemiological surveys have demonstrated that alpha(+)-thal
assemia is associated with increased susceptibility to uncomplicated malari
a among young children. It is further proposed that alpha(+)-thalassemia ma
y facilitate so-called "benign" Plasmodium vivax infection to act later in
life as a "natural vaccine" against severe Plasmodium falciparum malaria. H
ere, in a P. vivax-endemic region of PNG where the resident Abelam-speaking
population is characterized by a frequency of alpha(+)-thalassemia greater
than or equal to 0.98, we have discovered the mutation responsible for ery
throcyte Duffy antigen-negativity (Fy[a-b-]) on the FY*A allele. In this st
udy population there were 23 heterozygous and no homozygous individuals bea
ring this new allele (allele frequency, 23/1062 = 0.022). Flow cytometric a
nalysis illustrated a 2-fold difference in erythroid-specific Fy-antigen ex
pression between heterozygous (FY*A/FY*A(null)) and homozygous (FY*A/FY*A)
individuals, suggesting a gene-dosage effect, in further comparisons, we ob
served a higher prevalence of P. vivax infection in FY*A/FY*A (83/508 = 0.1
63) compared with FY*A/FY*A(null) (2/23 = 0.087) individuals (odds ratio =
2.05, 95% confidence interval = 0.47-8.91). Emergence of FY*A(null) in this
population suggests that P. vivax is involved in selection of this erythro
id polymorphism. This mutation would ultimately compromise alpha(+)-thalass
emia/P. vivax-mediated protection against severe P. falciparum malaria.