A parallel and modular deformable cell Car-Parrinello code

Citation
C. Cavazzoni et Gl. Chiarotti, A parallel and modular deformable cell Car-Parrinello code, COMP PHYS C, 123(1-3), 1999, pp. 56-76
Citations number
29
Categorie Soggetti
Physics
Journal title
COMPUTER PHYSICS COMMUNICATIONS
ISSN journal
00104655 → ACNP
Volume
123
Issue
1-3
Year of publication
1999
Pages
56 - 76
Database
ISI
SICI code
0010-4655(199912)123:1-3<56:APAMDC>2.0.ZU;2-S
Abstract
We have developed a modular parallel code implementing the Car-Parrinello [ Phys. Rev. Lett. 55 (1985) 2471] algorithm including the variable cell dyna mics [Europhys. Lett. 36 (1994) 345; J. Phys. Chem. Solids 56 (1995) 510]. Our code is written in Fortran 90, and makes use of some new programming co ncepts like encapsulation, data abstraction and data hiding. The code has a multi-layer hierarchical structure with tree like dependences among module s. The modules include not only the variables but also the methods acting o n them, in an object oriented fashion. The modular structure allows easier code maintenance, develop and debugging procedures, and is suitable for a d eveloper team. The layer structure permits high portability. The code displ ays an almost linear speed-up in a wide range of number of processors indep endently of the architecture. Super-linear speed up is obtained with a "sma rt" Fast Fourier Transform (FFT) that uses the available memory on the sing le node (increasing for a fixed problem with the number of processing eleme nts) as temporary buffer to store wave function transforms. This code has b een used to simulate water and ammonia at giant planet conditions for syste ms as large as 64 molecules for similar to 50 ps. (C) 1999 Elsevier Science B.V. All rights reserved.