An integrated protocol for clearing, de-clearing, and subsequent histochemi
cal analysis of beta-galactosidase expression in mid-gestation mouse embryo
s is described. As tissue morphology is preserved after clearing and de-cle
aring, this protocol permits rapid identification and precise analysis of b
eta-galactosidase expression among a large number of samples. Compared to t
he conventional cryosectioning and histochemical analysis, the proposed pro
tocol saves a considerable amount of time and resources.