Guanine-rich oligonucleotides and short telomeric DNA sequences can self-as
sociate into G-quartet stabilized complexes. We discovered that this self-a
ssociation can occur in sequencing reactions and that higher-order structur
es stimulate DNA polymerase to synthesize extended DNA strands. Base analog
ues were used to identify Hoogsteen base pairings as stabilizing forces in
these stimulatory DNA structures. Scanning force microscopy confirmed that
quartet-DNA was formed from these oligomers and that these extended, four-s
tranded structures could be bound by DNA polymerase. Since guanine quartet-
stabilized structures are proposed to exist in vivo, such structures may st
imulate DNA polymerization in vivo.