The Texas Water Development Board has developed a two-dimensional (2-D) fis
h habitat modeling procedure for estimating instream flow needs. The proced
ure makes use of a 2-D hydrodynamic model, a Geographical Information Syste
m (GIS), and an optimization scheme to suggest alternative values for instr
eam flows. After the selection of representative and/or critical stream seg
ments, fish surveys are conducted to determine habitat preferences of nativ
e species. A 2-D hydrodynamic model is developed, based on bathymetric, sta
ge-discharge, and calibration data. Results of hydrodynamic modeling at var
ious now rates are combined with substrate and habitat maps in a GIS. Spati
al queries based an fish preferences are conducted to determine suitable ha
bitat at each flow rate, allowing the development of habitat versus now rel
ationships for each species. Using these relationships, habitat features of
alternative instream flow strategies can be compared. A genetic algorithm
based optimization package is used to aid in the search for instream flow s
trategies during normal, dry, and drought conditions. Examples from the app
lication of this assessment procedure to Sandies Creek within the Guadalupe
River Basin, TX are presented.