We have investigated the organization, on the plasma membrane and in deterg
ent-insoluble membrane vesicles, of two neuronal glycosylphosphatidylinosit
ol-anchored (GPI) proteins: Thy-1, a negative regulator of transmembrane si
gnalling; and prion protein, whose rapid endocytosis and Cu2+ binding sugge
st that it functions in metal ion uptake. Prion protein occurred on the neu
ronal surface at high density in domains, located primarily at the cell bod
y, which were relatively soluble in detergent. Thy-1, although much more ab
undantly expressed on neurons, occurred at lower density over much of the s
urface of neurites land in lower abundance at the cell body) in domains tha
t were highly resistant to detergent solubilization, Detergent-insoluble me
mbrane vesicles contained Thy-1 at a density similar to that on the neurona
l surface. Vesicles containing each protein could be separated by immunoaff
inity isolation; lectin binding showed that they were enriched in different
glycoproteins. Our results demonstrate a structural diversity of the domai
ns occupied by functionally different GPI proteins.