An energetically significant leak of protons occurs across the mitochondria
l inner membranes of eukaryotic cells. This seemingly wasteful proton leak
accounts for at least 20% of the standard metabolic rate of a rat. There is
evidence that it makes a similar contribution to standard metabolic rate i
n a lizard. Proton conductance of the mitochondrial inner membrane can be c
onsidered as having two components: a basal component present in all mitoch
ondria, and an augmentative component, which may occur in tissues of mammal
s and perhaps of some other animals. The uncoupling protein of brown adipos
e tissue, UCP1, is a clear example of such an augmentative component. The n
ewly discovered UCP1 homologs, UCP2, UCP3, and brain mitochondrial carrier
protein 1 (BMCP1) may participate in the augmentative component of proton l
eak. However, they do not appear to catalyze the basal leak, as this is obs
erved in mitochondria from cells which apparently lack these proteins. Wher
eas UCP1 plays an important role in thermogenesis, the evidence that UCP2 a
nd UCP3 do likewise remains equivocal.