A critical reexamination of turtle relationships continues to support a sis
ter-group relationship of turtles with a clade of marine reptiles, Sauropte
rygia, within crown-group Diapsida (Sauria). The high Homoplasy Index raise
s concerns about the phylogenetic information content of various morphologi
cal characters in broad-scale phylogenetic analyses. Such analyses may also
suffer from inadequate statements of primary homology. Several such statem
ents that have played an important role in the analysis of turtle relations
hips (dermal armor, acromion, astragalo-calcaneal complex, hooked fifth met
atarsal) are reviewed in detail. An evolutionary scenario for the origin of
the turtle bauplan suggests an aquatic origin of turtles, which is support
ed not only by their sauropterygian relationships, but also by paleobiogeog
raphic and stratigraphic considerations. However, turtle relationships rema
in labile, and further investigations of their relationships are required,
involving molecular and physiological data.