Does the KdpA subunit from the high affinity K+-translocating P-type KDP-ATPase have a structure similar to that of K+ channels?

Citation
Sr. Durell et al., Does the KdpA subunit from the high affinity K+-translocating P-type KDP-ATPase have a structure similar to that of K+ channels?, BIOPHYS J, 78(1), 2000, pp. 188-199
Citations number
20
Categorie Soggetti
Biochemistry & Biophysics
Journal title
BIOPHYSICAL JOURNAL
ISSN journal
00063495 → ACNP
Volume
78
Issue
1
Year of publication
2000
Part
1
Pages
188 - 199
Database
ISI
SICI code
0006-3495(200001)78:1<188:DTKSFT>2.0.ZU;2-Z
Abstract
Evidence is presented that the transmembrane KdpA subunit of the high affin ity K+-translocating P-type Kdp-ATPase is evolutionarily derived from the s uperfamily of 2TM-type K+ channels in bacteria. This extends a previous stu dy relating the K+ channels to the KtrAB, Trk, Trk1,2, and HKT1 K+ symporte r superfamily of both prokaryotes and eukaryotes, Although the channels are formed by four single-MPM motif subunits, the transmembrane KdpA subunit a nd the transmembrane subunit of the symporter proteins are postulated to ha ve four corresponding MPM motifs within a single sequence. Analysis of 17 K dpA sequences reveals a pattern of residue conservation similar to that of the symporters and channels, and consistent with the crystal structure of t he KcsA K+ channel. In addition, the most highly conserved residues between the families, specifically the central glycines of the P2 segments, are th ose previously identified as crucial for the property of K+-selectivity tha t is common to each protein. This hypothesis is consistent with an experime ntal study of mutations that alter K+ binding affinity of the Kdp transport er. Although most of the results of a previous study of the transmembrane t opology of KdpA are consistent with the 4-MPM model, the one deviation can be explained by a plausible change in the structure due to the experimental method.