The taxonomic status of Quahog Parasite Unknown (QPX), a protist causing di
sease and high mortality in hardclams (Mercenaria mercenaria) from Canada t
o Virginia, has not been firmly established. The comparison of QPX 18s rDNA
sequences with small-subunit rRNA (SSU RNA) sequences available in the pub
lic domain places this organism firmly in the phylum Labyrinthulomycota. Wi
th the limited SSU data currently available for the order Labyrinthulida, p
lacement within the family Thraustochytriidae is somewhat more tenuous. Mor
phological examination also suggests placement in the Labyrinthulomycota. T
he absence of sageno-genetosomes and ectoplasmic nets suggests that QPX is
a more primitive member of the phylum. The placement of QPX SSU sequence ba
sal to all available Labyrinthulomycota SSU sequences other than that of La
byrinthuloides minuta tends to support this assessment.