The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000

Citation
A. Bairoch et R. Apweiler, The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000, NUCL ACID R, 28(1), 2000, pp. 45-48
Citations number
7
Categorie Soggetti
Biochemistry & Biophysics
Journal title
NUCLEIC ACIDS RESEARCH
ISSN journal
03051048 → ACNP
Volume
28
Issue
1
Year of publication
2000
Pages
45 - 48
Database
ISI
SICI code
0305-1048(20000101)28:1<45:TSPSDA>2.0.ZU;2-3
Abstract
SWISS-PROT is a curated protein sequence database which:strives to provide a high level of annotation (such as the description of the function of a pr otein, its domains structure, post-translational modifications, variants, e tc.), a minimal level of redundancy and high level of integration with othe r databases, Recent developments of the database include format and content enhancements, cross-references to additional databases, new documentation files and improvements:to TrEMBL, a computer-annotated supplement to SWISS- PROT. TrEMBL consists of entries in SWISS-PROT-like format derived from the translation of all coding sequences (CDSs) in the EMBL Nucleotide Sequence Database, except the CDSs already included in SWISS-PROT. We also describe the Human Proteomics Initiative (HPI), a major project to annotate all kno wn human sequences according to the quality standards of SWISS-PROT, SWISS- PROT is available at: http://www.expasy.ch/sprot/ and http://www.ebi.ac.uk/ swissprot/.