Three views of microbial genomes

Citation
Lj. Jensen et al., Three views of microbial genomes, RES MICROB, 150(9-10), 1999, pp. 773-777
Citations number
21
Categorie Soggetti
Microbiology
Journal title
RESEARCH IN MICROBIOLOGY
ISSN journal
09232508 → ACNP
Volume
150
Issue
9-10
Year of publication
1999
Pages
773 - 777
Database
ISI
SICI code
0923-2508(199911/12)150:9-10<773:TVOMG>2.0.ZU;2-L
Abstract
We describe here GenomeAtlases as a method for visualising three different aspects of complete microbial chromosomes: repeats, DNA structural characte ristics, and base composition. We have applied this method to all publicly available genomes, and find a general strand preference of global repeats. The atlas for the Mycoplasma genitalium genome is presented as an example, and results from all three views are consistent with known characteristics of the genome. (C) 1999 Editions scientifiques et medicales Elsevier SAS.