Several intragenically linked microsatellites have been identified in the f
loral regulatory genes A. sandwicense APETALA1 (ASAP1) and A. sandwicense A
PETALA3/TM6 (ASAP3/TM6) in 17 species of the Hawaiian and North American Ma
diinae (Asteraceae). Thirty-nine microsatellite loci were observed in the i
ntrons of these two genes, suggesting that they are hotspots for microsatel
lite formation. The sequences of four of these microsatellites were mapped
onto the phylogenies of these floral regulatory genes, and the structural e
volution of these repeat loci was traced. Both nucleotide substitutions and
insertion/deletion mutations may be responsible for the formation of perfe
ct microsatellites from imperfect repeat regions (and vice versa). (C) 2000
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