N. Sjakste et al., A novel gene is transcribed in the chicken alpha-globin gene domain in thedirection opposite to the globin genes, MOL G GENET, 262(6), 2000, pp. 1012-1021
A novel gene transcribed in the direction opposite to that of the globin ge
nes was found in the chicken alpha-globin gene domain. Northern hybridisati
on with single-stranded riboprobes revealed that a 4.5-kb poly(A)(+) RNA is
transcribed in antisense polarity with respect to the globin genes. The tr
anscription unit encoding this RNA seems to overlap the entire cluster of a
lpha-globin genes and extends at least 15 kb upstream from pi, the first of
the alpha-globin genes. This new transcript shows partial sequence homolog
y with that encoded by the human "-14" gene. An oligonucleotide based on pa
rt of a restriction fragment of thicken DNA that is 80% homologous to exon
4 of the human "-14" gene hybridises with a 4.5-kb RNA molecule. In situ hy
bridisation of globin-antisense probes, that detect polyribosomal mRNAs of
1.7 and 2.5 kb on Northern blots, shows these "antisense" transcripts to be
present in the cytoplasm. The 4.5-kb RNA is absent in polyribosomal poly(A
)(+) RNA and may, hence, represent a nuclear pre-mRNA transcribed from the
chicken gene that is homologous to the human "-14" gene. The expression of
this gene is not specific to erythroid cells; analogous transcripts were al
so detected in poly(A)(+) RNA extracted from a chicken lymphoblastoma cell
line (HP50). Taken together, these data allow us to postulate the existence
in the chicken genome of a novel gene, for which we suggest the name "ggPR
X" in analogy to the murine mProx1, a gene identified in the upstream regio
n of the alpha-globin gene domain in mice.