A Sorghum propinquum BAC library, suitable for cloning genes associated with loss-of-function mutations during crop domestication

Citation
Yr. Lin et al., A Sorghum propinquum BAC library, suitable for cloning genes associated with loss-of-function mutations during crop domestication, MOL BREED, 5(6), 1999, pp. 511-520
Citations number
60
Categorie Soggetti
Plant Sciences","Animal & Plant Sciences
Journal title
MOLECULAR BREEDING
ISSN journal
13803743 → ACNP
Volume
5
Issue
6
Year of publication
1999
Pages
511 - 520
Database
ISI
SICI code
1380-3743(199912)5:6<511:ASPBLS>2.0.ZU;2-3
Abstract
A large insert Sorghum propinquum BAC library has been constructed to analy ze the physical organization of the sorghum genome and to facilitate positi onal cloning of sorghum genes and QTLs associated with the early stages of grain crop domestication. This library was established from 12 different li gations using high-molecular-weight DNA generated from either one cycle or two cycles of size selection. This library consists of 38 016 BAC clones wi th an estimated average insert size of 126 kb and coverage of 6.6 genome eq uivalents. The 6.6 genome-equivalent BAC library of S. propinquum provides a 99.7% probability of finding one or more BACs that contain genes of inter est. Twenty mapped DNA probes, ten homologous and ten heterologous, were us ed to screen the library, and 121 positive clones were identified, 6.05 per locus or 6.37 per probe.