The brain is generally considered immunoprivileged, although increasing exa
mples of immunological responses to brain antigens, neuronal expression of
major histocompatibility class I genes, and neurological autoimmunity have
been recognized. An adeno-associated virus (AAV) vaccine generated autoanti
bodies that targeted a specific brain protein, the NR1 subunit of the N-met
hyl-D-aspartate (NMDA) receptor. After peroral administration of the AAV va
ccine, transgene expression persisted for at least 5 months and was associa
ted with a robust humoral response in the absence of a significant cell-med
iated response. This single-dose vaccine was associated with strong anti-ep
ileptic and neuroprotective activity in rats for both a kainate-induced sei
zure model and also a middle cerebral artery occlusion stroke model at 1 to
5 months following vaccination. Thus, a vaccination strategy targeting bra
in proteins is feasible and may have therapeutic potential for neurological
disorders.