Ethanol preference, a component of alcoholism, has been known for four deca
des to differ greatly between C57BL/6 and BALB/c inbred mouse strains. For
mapping quantitative trait loci (QTLs) that affect ethanol preference, we u
sed a set of B6.C Recombinant QTL Introgression (RQI) strains, which carry
about 5% of the donor BALB/cJ (C) genome on a C57BL/6ByJ (B6) background. A
fter characterizing males of the progenitor and RQI strains for variations
in ethanol preference, we scanned their genome for polymorphisms at 244 din
ucleotide-repeat marker loci known to differ between B6 and C. Because of t
he introgression of BALB/c-type QTLs onto the B6 background, some strains s
howed ethanol preference significantly lower or higher than that of the bac
kground strain, suggesting that genetic interaction between ethanol prefere
nce QTLs and the background can be operative. The genomic region showing th
e strongest influence on ethanol preference was on mouse chromosome 15, and
corresponds to human chr.12 q11-q13. (C) 2000 Elsevier Science Inc. All ri
ghts reserved.