Pp. Berna et al., RESIDUE ACCESSIBILITY, HYDROGEN-BONDING, AND MOLECULAR RECOGNITION - METAL-CHELATE PROBING OF ACTIVE-SITE HISTIDINES IN CHYMOTRYPSINS, Biochemistry, 36(23), 1997, pp. 6896-6905
Subspecies defining the maturation pathway of bovine chymotrypsinogen
to alpha-chymotrypsin have been separated in a single chromatographic
run by affinity to iminodiacetic acid-Cu(II) [IDA-Cu(II)] immobilized
onto Novarose. A major highlight of the elution pattern is that, as ma
turation proceeds, these subspecies exhibit a correlated increase in a
ffinity toward IDA-Cu(II). This behavior is analyzed by a combination
of physicochemical and molecular modeling techniques to assess the con
tribution of the two histidines present in chymotrypsins, at positions
40 and 57 on the protein surface. Catalytic His-57 features adequate
surface accessibility to serve as a ligand to IDA-Cu(II), but its part
icipation is clearly ruled out by specific chemical modification. In c
ontrast, His-40, whose side chain is buried in the crystal structures
of both zymogen and mature enzyme, surprisingly proves the most plausi
ble candidate as an electron donor to IDA-Cu(II). This apparent confli
ct between histidine accessibility and their implication in IDA-Cu(II)
recognition has been rationalized on the basis of their flexibility a
nd/or hydrogen-bonding status, with the following outcome. First, hist
idine constitutes a useful reporter group for subtle protein conformat
ional fluctuations. Second, static accessibility computation alone pro
vides no unequivocal guideline as to whether a protein residue can ser
ve as a ligand. Third, this study is the first to document the occurre
nce of a screening effect due to hydrogen bonding of an otherwise ''ac
cessible'' histidine. A significant corollary to this finding would be
that the catalytic histidine is rigidly entrapped in a remarkably str
ong hydrogen-bonding network, a situation that may pertain to mechanis
tic aspects of catalysis.