The crystal structure of a heterodimer between the ligand-binding domains (
LBDs) of the human RAR alpha bound to a selective antagonist and the consti
tutively active mouse RXR alpha F318A mutant shows that, pushed by a bulky
extension of the ligand, RAR alpha helix H12 adopts an antagonist position.
The unexpected presence of a fatty acid in the ligand-binding pocket of RX
R alpha F318A is likely to account for its apparent "constitutivity." Speci
fic conformational changes suggest the structural basis of pure and partial
antagonism. The RAR-RXR heterodimer interface is similar to that observed
in most nuclear receptor (NR) homodimers. A correlative analysis of 3D stru
ctures and sequences provides a novel view on dimerization among members of
the nuclear receptor superfamily.