Minisatellite variant repeat (MVR) mapping using the polymerase chain react
ion (PCR) was applied to a paternity case lacking a mother to evaluate the
paternity probability. After three flanking polymorphic sites at each of MS
31A and MS32 loci were investigated from the child and alleged father, alle
le-specific MVR-PCR was performed using genomic DNA. It was confirmed that
one allele in the child was identical to that in the alleged father at both
loci. Mapped allele codes were compared with allele structures established
from population surveys. No perfect matches were found although some motif
s were shared with other Japanese alleles. The paternity index and probabil
ity of paternity exclusion at these two MVR loci were then estimated, estab
lishing the power of MVR-PCR even in paternity cases lacking a mother.