Molecular genetics and biochemical studies were performed in homozygotes fo
r the R2 allele (4070G) in the factor V gene, most of them affected by coro
nary artery disease. Novel polymorphisms (G642T, 156Ser: T1328C, 385Met/Thr
), among which a functional candidate (A6755G, 2194Asp/Gly) located in the
C2 domain of FV, were identified in the R2 gene. In chromatographic studies
R2 FV appeared qualitatively identical to normal FV. However, a relative i
ncrease of the more thrombogenic and more glycosylated FV isoform (FV1) was
observed in plasma of 2194Gly homozygotes (mean FV1/FV2 ratio 0.71, 95% CI
0.66-0.77) as compared to R2-free controls (0.37, 95% Cl 0.34-0.40). We co
nclude that carriership of the R2 FV gene is associated with an imbalance b
etween the two functionally different FV isoforms, and propose that genetic
ally determined differential glycosylation of FV could represent a novel me
chanism of thrombotic disease.