We investigated the relative importance of resource use and geography on ge
netic differentiation in the sister-species pair of generalist and speciali
st bark beetles: Dendroctonus ponderosae and D. jeffreyi (Coleoptera: Scoly
tidae). In two regions, where the distributions of these species overlap, w
e collected specimens of the generalist from multiple host species and spec
imens of the specialist from its single host species. Using allozyme techni
ques, we uncovered genetic differentiation between generalist populations o
n different host species in the same region (one locus in each region). How
ever, a much stronger pattern of differentiation was found between speciali
st populations in the two distantly separated regions (three loci). With mt
DNA, we found no significant differentiation between regions in the special
ist, or among host species in the generalist, although there was some diffe
rentiation between regions in the generalist (AMOVA, P < 0.05). Overall, th
e generalist populations maintained approximately 10 times the genetic vari
ation in mtDNA as the specialist populations, which suggests that the speci
alist either has generally smaller population sizes than the generalist, or
has experienced a historical population bottleneck.