O. Chesneau et al., The value of rRNA gene restriction site polymorphism analysis for delineating taxa in the genus Staphylococcus, INT J SY EV, 50, 2000, pp. 689-697
Citations number
46
Categorie Soggetti
Microbiology
Journal title
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
A total of 101 staphylococcal strains were ribotyped using EcoRI and HindII
I as restriction enzymes and plasmid pBA2 as the rDNA probe. Isolates from
10 newly described staphylococcal taxa were among those examined. All the r
ibotypes were added to our database. Staph DB. which now contains the sizes
of the bands of 135 EcoRI and 120 HindIII ribotypes from 408 strains belon
ging to 42 staphylococcal taxa. The relatedness of ribotypes was evaluated
by using the Dice coefficient. The ribotypes, and thus the strains, were cl
ustered by the unweighted pair group method with averages (UPGMA). Separati
on into clusters correlated well with the delineation of the staphylococcal
species but not with that of the different subspecies. No discrimination w
as possible between Staphylococcus vitulinus and Staphylococcus pulvereri.
Ecovar-specific groups were evident within Staphylococcus intermedius and S
taphylococcus hyicus, The data increase the usefulness of rRNA gene restric
tion site polymorphism analysis for staphylococcal taxonomy.