Optimal population size for RFLP-assisted cultivar identification in alfalfa (Medicago sativa L.)

Citation
P. Labombarda et al., Optimal population size for RFLP-assisted cultivar identification in alfalfa (Medicago sativa L.), AGRONOMIE, 20(2), 2000, pp. 233-240
Citations number
20
Categorie Soggetti
Agriculture/Agronomy
Journal title
AGRONOMIE
ISSN journal
02495627 → ACNP
Volume
20
Issue
2
Year of publication
2000
Pages
233 - 240
Database
ISI
SICI code
0249-5627(200003)20:2<233:OPSFRC>2.0.ZU;2-M
Abstract
The ability of RFLP markers to distinguish between 2 heterogeneous alfalfa ecotypes, "Vogherese" and "Maremmana", was correlated with the number of pl ants sampled in either single-plant or bulk analyses. Independent subsample populations of 20 and 50 plants were compared for variance component parti tioning and band frequencies in 20-, 50- and 100-plant subpopulations of Ma remmana. Homogeneity within 3 independent bulks of the same size as given a bove was taken as a measure of bulk optimal size. A minimum of 50 plants is required for both single-plant and bulk analyses; however, for a large maj ority of bands analysed, no significant differences were detected for their frequency among populations of 20, 50 and 100 plants, with the exception o f 6 bands out of 48. One ecotype-specific marker was found through bulk ana lysis. Results are discussed in relation to the improvement of RFLP methodo logy for cultivar identification in alfalfa.