A novel fluorescent probe, 3-(acetylamino)-6-aminoacridine (AA-Ac), has bee
n synthesized and its applicability to the analysis of picomole levels of N
-linked glycans investigated, AA-Ac was found to be an excellent derivatiza
tion reagent for N-linked glycans, giving at least twice the intensity of f
luorescence as its predecessor 2-aminoacridone, AA-Ac-labeled glycans were
analyzed by both normal and reversed-phase HPLC. They were also amenable to
enzymatic sequencing and analysis by MALDI-TOF mass spectrometry, free zon
e capillary electrophoresis, and capillary electrophoresis/electrospray ion
ization mass spectrometry.