Analyses of RAPD data for detection of host specialization in Sclerotinia homoeocarpa

Citation
T. Hsiang et al., Analyses of RAPD data for detection of host specialization in Sclerotinia homoeocarpa, PLANT PATH, 49(2), 2000, pp. 269-275
Citations number
31
Categorie Soggetti
Plant Sciences
Journal title
PLANT PATHOLOGY
ISSN journal
00320862 → ACNP
Volume
49
Issue
2
Year of publication
2000
Pages
269 - 275
Database
ISI
SICI code
0032-0862(200004)49:2<269:AORDFD>2.0.ZU;2-J
Abstract
Upgma analysis, principal component analysis, genetic diversity analysis an d genetic distance analysis of RAPD data were used to assess the extent of host specialization in 50 isolates of S. homoeocarpa from five turfgrass ho sts. In upgma analysis and principal component analysis, the occurrence of host specialization was not readily apparent based on visual inspection. Ge netic diversity analysis showed significant differentiation among isolates from different host species (G(ST) = 0.34, P < 0.001). The strongest eviden ce for some degree of host specialization came from the statistical analysi s of genetic distances among isolates. By grouping pairwise genetic distanc es between isolates based on their host species, and analysing for average distance within the same host species and among different host species, it was found that the average distance within species was less than among spec ies (P < 0.0001). An analysis of molecular variance of the genetic distance s among isolates found that 32.3% of the total variation was attributable t o host species. It is concluded that these isolates of S. homoeocarpa showe d a weak level of host specialization, which was not readily apparent by up gma or principal component analyses, but was revealed by genetic diversity analysis and statistical analysis of genetic distances among isolates. Inoc ulation tests on different host species and tests using a greater number of isolates are required to confirm the extent of specialization.