We developed a strategy to improve the properties of ligands selected from
phage-displayed random peptide libraries. A site-directed mutagenesis proto
col that introduces mutations and extends the size of a target sequence has
been set up to generate diversity in a single or in a population of clones
. The pool of mutants thus created is screened to identify variants with th
e desired properties. We refer to this strategy as 'in vitro evolution' of
ligands.
Here we report the application of this in vitro evolution protocol to the i
dentification of improved ligands for HCV-specific serum antibodies. A sing
le clone or population of clones were processed to generate a secondary lib
rary. Screening of these libraries with sera from HCV-infected patients ide
ntified peptides with an enhanced and broadened ability to detect HCV-speci
fic serum antibodies.