The circulation patterns in St. Andrew Bay, Florida are revealed through th
e application of a well-tested, extensively used three-dimensional hydrodyn
amic model. A high resolution grid resolving both the horizontal and vertic
al directions is used with a systematically developed set of forcing functi
ons to simulate conditions over a full year. Water levels at the three open
boundaries are deduced from a year-long deployment of pressure gauges, and
freshwater loadings are based upon drainage basin characteristics and prec
ipitation measurements. Model validation involves comparisons with hydrogra
phic casts taken at twelve stations distributed throughout the bay at month
ly intervals. The relative average error between the observed and model-pre
dicted salinity is 15% for the surface of the water column and 4% for the b
ottom. The annual net flow balance consists of an influx of water at the tw
o Intracoastal Waterway open boundaries, with that water exiting to the Gul
f of Mexico. An average of about 100 m(3) s(-1) enters from East Bay and ab
out 40 m(3) s(-1) enters through West Bay. On shorter time scales, the flow
balance is quite variable both in terms of magnitude and direction. This s
tudy also presents methods to overcome the paucity of data that is usually
available for the development of such a model. These include techniques to
take bottom pressure data sets with short gaps and create reliable sea surf
ace elevation boundary conditions and to take precipitation data and draina
ge basin characteristics and produce estimates of freshwater inflows.