With the advent of oligonucleotides as potential therapeutics, the search f
or modified analogs of nucleic acids having improved properties, such as in
creased stability against nucleases, improved cellular uptake and enhanced
binding affinity to complementary nucleic acids with high specificity, has
accelerated rapidly and has attracted considerable attention. Specific bind
ing through natural base pairing has become increasingly important for the
development of DNA based diagnostics as well as therapeutics in the form of
antisense and antigene oligonucleotides. Modified DNA based oligonucleotid
es can affect the gene expression at the level of translation as well as tr
anscription. The automation of oligonucleotide synthesis, the development o
f better coupling reagents as well as support system and efficient scale-up
s have expanded the application of these molecules to diverse areas of fund
amental as well as applied biological research. The modified molecules are
expected to find answers to understanding, unveiling and utilizing the intr
icate methods of cell functioning at the molecular level and would provide
applications in genetic engineering, gene therapy and cellular regulations
in an array of conditions. In this review, the synthesis or the assembling
of oligonucleotides modified at the backbone, or at the base, or at the sug
ar residues, has been brought into sharp focus.